Saturday, September 7, 2013

Video: Daily Show Takes on the VA

VA hospitals
The Daily Show host Jon Stewart is back after his 12 week break, doing what he does best - using humor to tackle the big issues of the day. Stewart's thought-provoking look at the Veteran Affairs Department may be of interest to the HCV community.

The talk show host began by checking on the progress of the VA's backlogged benefits, however, instead the comedian discovered problems at numerous VA hospitals. Stewart mentioned the legionnaires outbreak, exposure to hepatitis and the failure to monitor mental health patients.

Accountability?
Stewart wanted to know who was fired or reprimanded at the VA hospitals for mishandling the above mentioned problems. Well, the outcome may surprise you. 

Bonuses?
For instance, what about the 700 veteran's exposed to hepatitis because of reused insulin pens at the Buffalo VA? During that time upstate regional director David West was awarded over 25,000 in bonuses. What!

The Daily Show host summed up the problems at the VA with this profound statement;

"Going to an American hospital, for a veteran, shouldn't require more courage than storming the beach at Normandy"

Welcome back Mr. Stewart.




http://www.thedailyshow.com/
Watch more clips from this episode or the entire show.

Friday, September 6, 2013

Development of Hepatitis B Compound, MIV-210 Has Been Discontinued

Medivir: The Collaboration with Daewoong Pharmaceutical for the Development of the Hepatitis B Compound, MIV-210 Has Been Discontinued

STOCKHOLM--(BUSINESS WIRE)-- Regulatory News: Medivir AB (MVIR-B.ST) today announced that it has discontinued the development of its hepatitis B compound MIV-210 based on a joint decision with Daewoong Pharmaceutical Co. Ltd., (South Korea).

Under the terms of this collaboration agreement Daewoong has been responsible for the R&D work. MIV-210 has a demonstrably competitive antiviral activity but, like other drugs of this class, does not completely eradicate HBV. The commercial environment for HBV drugs, with the current standard of care approaching generic status, requires a robust cure profile. To achieve this cure profile would require combination with other drugs with different and new mechanisms.

“In light of the characteristics MIV-210 could offer for the treatment of Hepatitis B, we have together with our partner Daewoong decided to abandon the development activities with MIV-210”, said Maris Hartmanis, CEO, Medivir AB.

About Medivir

Medivir is an emerging research-based pharmaceutical company focused on infectious diseases. Medivir has world class expertise in polymerase and protease drug targets and drug development which has resulted in a strong infectious disease R&D portfolio. The Company’s key pipeline asset is simeprevir, a novel protease inhibitor in late phase III clinical development for hepatitis C that is being developed in collaboration with Janssen R&D Ireland. Medivir has also a broad product portfolio with prescription pharmaceuticals in the Nordics.

For more information about Medivir AB, please visit the Company’s website: www.medivir.com

Medivir is a collaborative and agile pharmaceutical company with an R&D focus on infectious diseases and a leading position in hepatitis C. We are passionate and uncompromising in our mission to develop and commercialize innovative pharmaceuticals that improve people’s health and quality of life.

This information was brought to you by Cision http://news.cision.com

Contact:
Medivir
Rein Piir, EVP Corporate Affairs & IR
Mobile: +46 708 537 292

Read at BioSpace.com

Sofosbuvir: Firms Spar Over Hepatitis Drug

 
Volume 91 Issue 36 | p. 16 | News of The Week
Issue Date: September 9, 2013 | Web Date: September 5, 2013

Source - Chemical and Engineering News

Firms Spar Over Hepatitis Drug

Patents: Merck & Co., too, claims a stake in hepatitis C drug from Gilead

By Lisa M. Jarvis

As Gilead prepares for the launch of sofosbuvir, a small-molecule hepatitis C treatment that is expected to rake in billions of dollars annually, competitors are angling for a piece of the action. The latest firm to come forward is Merck & Co., which alleges that sofosbuvir’s structure is covered by patents generated in its search for hepatitis C treatments.

According to the Centers for Disease Control & Prevention, roughly 3.2 million Americans are infected with the hepatitis C virus (HCV). Battling it traditionally required a harsh, nearly yearlong regimen involving daily doses of the antiviral medication ribavirin and weekly injections of interferon. In 2011, Merck and Vertex Pharmaceuticals both launched second-generation antivirals that, when added to the combination therapy, significantly shorten treatment time.
Sofosbuvir, which came to Gilead through its 2012 acquisition of Pharmasset, would be part of the first all-oral treatment for HCV. With the Food & Drug Administration likely to approve using the drug with ribavirin before the end of the year, analysts believe Gilead could see more than $2 billion in sales in 2014 and even more in the years ahead.
 
“If our projections for peak sales are accurate (over $10 billion), we are not surprised that many companies have pursued complaints against Gilead to either prevent launch or receive royalties,” Deutsche Bank stock analyst Robyn Karnauskas said in a note to investors.
In a letter dated Aug. 5, Merck notified Gilead that it would grant the firm a license to two patents related to sofosbuvir in exchange for a 10% royalty on sales of the drug. Merck asked for a reply by Aug. 31; Gilead filed a preemptive lawsuit on Aug. 30.
 
The Merck suit comes as litigation between Gilead and Idenix Pharmaceuticals winds through the courts. Merck and Idenix both claim that sofosbuvir is covered by their patents for families of nucleoside derivatives that block RNA viral polymerase.
Analysts think Merck and Idenix are unlikely to prevail. Sofosbuvir’s activity is due to a 2'-methyl, 2'-fluoro substitution on the sugar piece of the nucleoside, a specific feature that does not seem to be in either company’s patents, says Howard Liang of investment firm Leerink Swann. Indeed, Idenix lost the latest round of its legal fight against Gilead.
 
Chemical & Engineering News
ISSN 0009-2347
Copyright © 2013 American Chemical Society

Thursday, September 5, 2013

Long-term benefit of hepatitis C therapy in a safety net hospital system: a cross-sectional study with median 5-year follow-up

BMJ Open 2013;3:e003231 doi:10.1136/bmjopen-2013-003231
Infectious diseases
Research

Long-term benefit of hepatitis C therapy in a safety net hospital system: a cross-sectional study with median 5-year follow-up

Amit G Singal, Tushar D Dharia, Peter F Malet, Saleh Alqahtani, Song Zhang, Jennifer A Cuthbert

[Abstract]
[Full text]
[PDF]
[Previous versions]
[Review history]
[Supplementary Data]

Author Affiliations
1Department of Internal Medicine, UT Southwestern Medical Center and Parkland Memorial Hospital, Parkland Health and Hospital System, Dallas, Texas, USA
2Department of Clinical Sciences, University of Texas Southwestern, Dallas, Texas, USA
Correspondence to Dr Jennifer A Cuthbert; jennifer.cuthbert@utsouthwestern.edu
Received 15 May 2013
Revised 16 July 2013
Accepted 19 July 2013
Published 2 September 2013

Abstract

Objectives To demonstrate the survival benefit from sustained virological response (SVR) in a safety net hospital population with limited resources for hepatitis C virus (HCV) therapy.

Design and setting We conducted a retrospective study at an urban safety net hospital in the USA.

Participants and intervention 242 patients receiving standard HCV therapy between 2001 and 2006.

Primary and secondary outcome measures Response rates, including SVR, were recorded for each patient. Univariate and multivariate analyses were performed to identify predictors of SVR and 5-year survival.

Results - A total of 242 eligible patients were treated. Treatment was completed in 197 (81%) patients, with 43 patients discontinuing therapy early—32 due to adverse events and 11 due to non-compliance. Complications on treatment were frequent, including three deaths. SVR was achieved in 83 patients (34%). On multivariate analysis, independent predictors of a decreased likelihood of achieving SVR included African–American race (OR 0.20, 95% CI 0.07 to 0.54), genotype 1 HCV infection (OR 0.25, 95% CI 0.13 to 0.50) and the presence of cirrhosis (OR 0.26, 95% CI 0.12 to 0.58). Survival was 98% in those achieving SVR (median follow-up 72 months) and 71% in non-responders and those discontinuing therapy (n=91, median known follow-up 65 and 36 months, respectively). On multivariate analysis, the only independent predictor of improved survival was SVR (HR 0.12, 95% CI 0.03 to 0.52). Both cirrhosis and hypoalbuminaemia were independent predictors of increased mortality.

Conclusions Treatment before histological cirrhosis develops, in combination with careful selection, may improve long-term outcomes without compromising other healthcare endeavours in safety net hospitals and areas with financial limitations.

INFECTIOUS DISEASES
HEALTH ECONOMICS
PUBLIC HEALTH

Article summary
Article focus
Chronic hepatitis C is common in urban populations with limited financial resources.
Individual patient characteristics can limit success.

Key messages
Selection process identifies candidates with greater likelihood of better compliance.
Survival benefit from successful treatment can be achieved with less expensive, older therapies.

Strengths and limitations of this study
Clear demonstration of long-term survival benefit in a high-risk population.
Single institution retrospective study.

Introduction
For many years, standard of care for patients with chronic hepatitis C virus (HCV) included treatment with pegylated interferon and ribavirin1 based on evidence from randomised controlled trials (RCTs).2–4 Conditions in RCTs are often very different than those of clinical practice. Given this potential discrepancy between an intervention's efficacy (the effect under carefully controlled conditions) and effectiveness (the effect when implemented in real-world settings), there is increasing emphasis on comparative effectiveness research to improve delivery of care.5 ,6 Accordingly, the National Institute of Health recently included the evaluation of real-world outcomes of healthcare interventions in liver disease as a priority area for future research.

Prior studies evaluating HCV therapy have primarily included well-insured, Caucasian patients followed in academic centres. However, HCV therapy is less well described among the underinsured, urban, minority patients. Some have concluded that current HCV therapy may be ineffective for these patients, warranting new strategies.7 However, we hypothesised that improved HCV outcomes are possible among this difficult-to-treat population with the aid of careful patient selection.

Screening for infection in the birth cohort with the highest prevalence of chronic HCV infection, that is, those born between 1945 and 1965, was controversial. While the Centers for Disease Control and Prevention have made a strong recommendation for this approach,8 the USA Public Service Task Force (USPSTF) was initially less enthusiastic (Grade C).9 However, USPSTF now supports screening in those at high risk (Grade B), previously considered optional, and also birth cohort screening.10 The primary aim of our study was to report the long-term benefit of HCV therapy in an American urban population with a high proportion of difficult-to-treat patients who were followed in a safety net hospital.

Methods
Study population

We conducted a chart review of all patients initiated on HCV treatment between November 2001 and October 2006. Eligible patients were seen in the faculty attending supervised Liver Clinic at Parkland Health and Hospital System (PHHS). Clinic patients were evaluated initially by a member of the clinic nursing staff followed by Gastroenterology trainees and/or Internal Medicine residents, under the supervision of Hepatology faculty members (n=6). After patients had fulfilled a list of basic requirements (figure 1), the final decision to initiate treatment for any individual patient was made by the supervising attending physician based on his/her assessment of the patient's candidacy.

Click On Image To Enlarge



Figure 1
Screening algorithm.

Once the treatment decision was made, demographics for all patients were entered into an electronic file maintained by the clinic nursing staff. The electronic file was used for this retrospective medical record review. The clinic nursing staff also saw all patients to provide instructions on medications as well as on interim follow-up visits and offered telephone advice. Patients were regularly seen in the Liver Clinic while on treatment and followed until sustained virological response (SVR) or discontinuation, at which time they returned to primary care or remained in the Liver Clinic, depending on the complications of liver disease experienced. Long-term follow-up was accomplished using the Social Security Death Index (prior to the regulatory 10-year embargo on information and removal of records from the State of Texas) and the combined electronic medical records of PHHS and the University Hospitals of UT Southwestern.

Treatment regimen
On the basis of consensus guidelines, patients were treated with weekly pegylated interferon α-2b 1.5 µg/kg and daily ribavirin 800–1200 mg. A combination of growth factors and dose reductions were used for patients with haemoglobin <10 g/dL, granulocyte count <500/µL or platelet counts <50 000/µL according to a standard protocol. The intended duration of therapy for genotypes 1, 4 and 6 was 48 weeks, and the intended duration of therapy for genotypes 2 and 3 was 24 weeks. All patients were scheduled to be seen at regular intervals during treatment, as deemed necessary based on treatment tolerance, and were followed for an additional 24 weeks after completion of therapy to determine the presence or absence of SVR.

Data collection
The patient demographics, clinical history, laboratory data and imaging results were obtained through review of computerised and paper medical records. Demographics, date of HCV therapy initiation, medication starting doses, medication dose reductions, use of growth factors, date of treatment discontinuation and response rates while on therapy were documented. Response rates included early virological response, end-of-treatment response and/or SVR rates. We also recorded complication rates, including any hospitalisations and/or deaths. Laboratory data recorded included HCV genotype, baseline HCV viral load, white cell count, haemoglobin, platelet count, creatinine, aspartate aminotransferase, alanine aminotransferase, bilirubin, albumin, international normalised ratio and α fetoprotein. Imaging and liver biopsy data were reviewed to determine the presence or absence of cirrhosis. The presence of cirrhosis was based on histology or imaging showing a cirrhotic appearing liver with associated signs of portal hypertension including splenomegaly, varices or thrombocytopenia. Date of death for patients was ascertained using the PHHS electronic medical record and Social Security Death Files.

Statistical analysis
For continuous variables, we summarised the data by mean and SD, and compared groups using a two-sample Student's t test. For categorical variables, we computed percentages and compared groups using Fisher's exact test. We used a multivariate logistic regression model, with stepwise variable selection, to determine predictors for SVR. Statistical significance was defined as a p value <0.05 on univariate and multivariate analyses. All analyses were performed using SAS V.9.2 (SAS Institute, Cary, North Carolina, USA).

Results
Eligibility for therapy

The study participants comprised all patients in the Liver Clinic meeting selection criteria and undergoing antiviral treatment for chronic HCV infection between November 2001 and October 2006. Every patient with chronic HCV being followed in the Liver Clinic or newly referred by a primary care provider was considered for treatment once pegylated interferon was approved by the Pharmacy and Therapeutics Committee in 2001. Between 2001 and 2006, 1966 patients accounted for 2370 new referrals; of these 126 received at least one dose of pegylated interferon and ribavirin. The remaining patients never became eligible or were deemed unsuitable. In an electronic look-back over new patient referrals from a 2-year period (2004 and 2005, n=989), 366 referrals (37%) were for patients ineligible for clinic appointments at that time (see algorithm, figure 1-below). Clinic appointments were offered to 597 individuals (623 referrals), of whom 389 attended the clinic at least once (ie, 35% did not keep the clinic appointment). A total of 57 individuals were started on treatment (15% of those keeping at least one appointment).

Common reasons for initial exclusion after electronic medical record review, that followed referral from a primary care provider, included severe thrombocytopenia (defined as platelet count <50 000/µL), uncontrolled diabetes (defined as HbA1C>9%), uncontrolled depression and positive urine toxicology screen (figure 1-below). Reasons for not initiating patients on therapy after physician evaluation in the clinic included comorbid conditions (autoimmune disease, heart disease, lung disease and psychiatric disease), continued alcohol consumption, early-stage histology and/or socioeconomic barriers that would prevent regular follow-up during treatment.

Patient characteristics
Demographic and clinical characteristics of the study population are shown in table 1 and the online supplemental table. The study participants included 166 (68%) patients with genotype 1 infection, 64 (27%) with genotype 2 or 3 and 12 (5%) patients with other genotypes. The median age of the patients was 48 years (range 20–68 years), 72% were in the birth cohort 1945–1965 and 51% (n=123) were men. The patients were racially and ethnically diverse with 31% African-American, 14% Hispanic and 47% non-Hispanic white. Common comorbid conditions included depression or other psychiatric disease (74 patients, 31%), hypertension (68 patients, 28%) and diabetes mellitus (40 patients, 17%). Comorbid conditions potentially associated with decreased response rates included morbid obesity (body mass index (BMI)>40; 22 patients, 9%) and HIV (7 patients, 3%). Cirrhosis was present histologically in 31%, 36 patients biopsied before treatment initiation and another 40 patients by clinical criteria.

Table 1
Study population characteristics*
Newly referred patients (n=126 patients, with 164 separate referrals) were largely similar to patients entering the clinic through other processes (see online supplemental table). The latter group included patients seen in the clinic while meeting selection criteria, being followed awaiting formulary approval and those referred after an inpatient hospitalisation. The significant differences were the higher prevalence of diabetes (p=0.003) and the higher viral load (p=0.02) in the newly referred patients. The referral patient population had trends towards more African-Americans, higher BMI and fewer deaths in follow-up.

Treatment response
Therapy was completed in 197 (81%) patients, with 43 patients discontinuing treatment prematurely (figure 2). Therapy was discontinued for adverse events in 32 patients including three deaths and another 11 patients were non-compliant with the follow-up appointments. There was a trend towards higher treatment discontinuation rates for genotype 1 than genotype 2/3 patients but this did not reach statistical significance (p=0.16). Of the seven patients with HIV (6 Caucasian and genotype 1, 1 Hispanic and genotype 3), four discontinued therapy after side effects, none achieved SVR.



Figure 2
Results of patient evaluation and treatment. RNA negative=hepatitis C virus RNA negative at last measurement, on treatment (n=19) or less than 6 months off-treatment (n=6).
Overall, SVR was achieved in 83 (34%) patients, including 39 (24%) of those with genotype 1 and 39 (61%) with genotype 2/3 infection (p<0.001). There was no significant difference in rates of SVR between patients newly referred to the clinic (46/126, 37%) and patients in the clinic awaiting formulary approval or referred after an inpatient hospitalisation (36/116, 32%). Of note, 10 of 22 patients with morbid obesity (BMI range 41–50) were treated successfully; seven had genotype 1 infection, two of whom were African-American women.

SVR was obtained in only 11% of African-American patients, compared with 44% of non-Hispanic whites (p<0.001) and 38% of Hispanic patients (p=0.001). This difference in SVR rates was primarily seen among those with genotype 1 infection. SVR was achieved in only 7% of African-Americans with genotype 1 infection, compared with 40% of non-Hispanic whites (p<0.001) and 24% Hispanics (p=0.03). SVR rates did not significantly differ by race/ethnicity among patients with genotype 2/3 infection. African-Americans with genotype 2/3 infection had SVR in 60% of cases, compared with 55% of non-Hispanic whites (p=0.82) and 78% Hispanics (p=0.48).

Cirrhosis was associated with significantly lower rates of SVR, only 10 (13%) cirrhotic patients achieved SVR. Among genotype 1 patients, SVR was achieved in 34 (31%) of 108 patients without cirrhosis compared with only 5 (9%) of 57 patient with cirrhosis. Similarly, SVR rates were significantly higher among non-cirrhotic genotype 2/3 patients than those with cirrhosis (70% vs 35%, p=0.01).

In small numbers of patients (n=14), having three or more comorbid conditions reduced the likelihood of achieving SVR (3/14, 21%). Patients with diabetes were less likely to respond favourably (7/40, 18% SVR) as were those with hypertension (15/68, 22% SVR). Psychiatric disease (depression or schizophrenia) did not affect SVR rates (26/66, 39%).

Negative predictors of SVR on univariate analysis included HCV genotype 1 infection (p<0.001), African-American race (p<0.001), presence of cirrhosis (p=0.001), thrombocytopenia (p=0.005) and diabetes (p=0.02). Neither Hispanic ethnicity nor anaemia (Hb <12 g/dL) was a significant predictor of response. On multivariate analysis (table 2 - see below), independent predictors of failure to achieve SVR included African–American race (OR 0.20, 95% CI 0.07 to 0.54), genotype 1 HCV infection (OR 0.25, 95% CI 0.13 to 0.50) and the presence of cirrhosis (OR 0.26, 95% CI 0.12 to 0.58). These three factors were highly predictive of failure to achieve SVR, with a c-statistic of 0.77 (data not shown).
                    
Table 2
Factors predicting sustained virological response (SVR)*
From long-term follow-up after the start of treatment, we found that a total of 43 (18%) patients died, including 34 (20%) with genotype 1 infection and 9 (14%) with genotype 2/3. Survival was significantly more likely among patients who achieved SVR than non-responders (98% vs 71%, p<0.001) and those who discontinued therapy (98% vs 71%, p<0.001). Of the patients with cirrhosis achieving SVR, 90% (9/10) were presumed or known to be alive at least 5 years later. In contrast, 28 of the 43 patients known to have died had cirrhosis at the time of treatment (65%). Both diabetes and hypertension were associated with an increased risk of dying. Complete follow-up and survival analysis are shown in figure 3 and table 3. On multivariate analysis, cirrhosis and hypoalbuminaemia independently increased mortality, whereas SVR decreased mortality.
View this table:                                         
                                           
Table 3
Factors predicting mortality




Figure 3
Kaplan-Meier survival plot.
 
Adverse effects 
As summarised above, 43 (18%) patients discontinued treatment prior to completion including 32 patients for adverse events. Of the patients discontinued for adverse events, 26 required hospitalisation. The most common reasons for hospitalisation included infection (n=13), severe cytopenias (n=4), volume depletion (n=3) and chest pain (n=2). There were two patients whose therapy was discontinued after they developed hepatocellular carcinoma. Three (1%) patients died during therapy. One patient, whose course was complicated by depression and another, whose course was complicated by infection (pneumonia and tooth abscess), died out of the hospital from unknown causes. The third patient had gastrointestinal bleeding in the setting of non-steroidal anti-inflammatory drug use and died after developing streptococcal bacteraemia and acute renal failure.
 
Discussion 
While we found that SVR was achieved in only one-third of treated patients, the lower rates among African-American patients and those with underlying cirrhosis explain most of the difference. In addition, patients in safety net hospitals have multiple barriers to therapy initiation, with only a small minority being treatment eligible by the selection criteria used. In our cohort, less than 10% of patients referred for HCV were initiated on treatment.

Finally, HCV therapy has potentially severe adverse effects and careful patient selection is crucial. Our study, therefore, highlights several concepts applicable to current-day HCV practice despite the approval of telaprevir and boceprevir for patients with genotype 1 infection.11 ,12 In addition, our findings support early screening and detection of chronic HCV so that therapy can be started before progression to cirrhosis.
                             
HCV infection is particularly common among patients followed in safety net hospitals where resources are limited, making this an important population to study.13 ,14 Patients followed in safety net hospitals tend to be quite different from most clinical trial patients. Safety net hospitals have higher proportions of racial/ethnic minority patients, as well as higher rates of comorbid illnesses and socioeconomic barriers to care.15 Compared with a representative RCT of HCV treatment,2 our population was older, more obese, had a higher proportion of African-Americans and more advanced liver disease at presentation. In a prior study from a safety net hospital in New York City, only 14% of genotype 1 patients achieved SVR, with significantly lower rates among minority patients.7 Our ability to achieve higher SVR rates than that reported by Feuerstadt and colleagues may be related to differences in treatment eligibility. Although both protocols selected for suitable medical candidates, our protocol also selected more compliant patients. Whereas nearly 26% of patients in the study by Feuerstadt and colleagues were non-compliant with clinic visits, this led to therapy discontinuation in only 5% of patients in our study (p<0.001). The importance of adherence cannot be underestimated, with both early and SVRs being dependent on this single factor.16 Compliance will continue to be important in future therapy until regimens are simple and consist of long half-life oral medications with minimal side effects.
                             
Our study has several limitations. It was performed in a single large safety net hospital and may not be generalisable to other practice settings. Not all patients underwent liver biopsy prior to HCV treatment so the presence or absence of cirrhosis was also determined by imaging, which may not be as accurate. However, we believe that the limitations of this study are outweighed by its notable strengths including the size of our cohort, the unique patient population and the length of follow-up.
 
In conclusion, our study highlights several important lessons to remember even when using new protease inhibitor therapy. Multiple challenges, including socioeconomic barriers precluding compliance and comorbid illnesses, make only a small minority of patients followed in safety net hospitals eligible for HCV therapy. SVR occurs in only one-third of patients, with even lower rates among minority patients and those with underlying cirrhosis. Both early detection and careful patient selection remains crucial, given that severe adverse effects are seen in nearly 15% of patients. Data from long-term benefit studies, such as ours, as well as real-world effectiveness should be taken into account more than efficacy data from clinical trials, when weighing the risks and benefits of screening for chronic HCV and starting HCV therapy among patients followed in safety net hospitals in clinical practice.17
 
Footnotes
  • AGS and TDD equal first authors.
  • Contributors AGS participated in analysis and interpretation of the data; drafting of the manuscript; critical revision of the manuscript for important intellectual content. TDD and JAC participated in study design; acquisition of the data; review of clinical records; analysis and interpretation of the data; drafting of the manuscript; critical revision of the manuscript for important intellectual content. PFM participated in study design; critical revision of the manuscript for important intellectual content. SA participated in critical revision of the manuscript for important intellectual content. SZ participated in analysis and interpretation of the data; critical revision of the manuscript for important intellectual content.
  • Funding This project was supported in part by grants KL2 RR024983-04 and the ACG Junior Faculty Development Award.
  • Competing interests None.
  • Ethics approval University of Texas Southwestern Medical Center Institutional Review Board.
  • Provenance and peer review Not commissioned; externally peer reviewed.
  • Data sharing statement Extra data can be accessed via the Dryad data repository at http://datadryad.org/ with the doi:10.5061/dryad.qc57j.
This is an Open Access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 3.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/3.0/

References

Human Urine Metabolome: What Scientists Can See in Your Urine


"New urine-based diagnostic tests for colon cancer, prostate cancer, celiac disease, ulcerative colitis, pneumonia and organ transplant rejection are already being developed or are about to enter the marketplace, thanks in part to this work."

Human Urine Metabolome: What Scientists Can See in Your Urine

Sep. 5, 2013 — Researchers at the University of Alberta announced today that they have determined the chemical composition of human urine. The study, which took more than seven years and involved a team of nearly 20 researchers, has revealed that more than 3,000 chemicals or "metabolites" can be detected in urine. The results are expected to have significant implications for medical, nutritional, drug and environmental testing.

"Urine is an incredibly complex biofluid. We had no idea there could be so many different compounds going into our toilets," noted David Wishart, the senior scientist on the project.

Wishart's research team used state-of-the-art analytical chemistry techniques including nuclear magnetic resonance spectroscopy, gas chromatography, mass spectrometry and liquid chromatography to systematically identify and quantify hundreds of compounds from a wide range of human urine samples.

To help supplement their experimental results, they also used computer-based data mining techniques to scour more than 100 years of published scientific literature about human urine. This chemical inventory -- which includes chemical names, synonyms, descriptions, structures, concentrations and disease associations for thousands of urinary metabolites -- is housed in a freely available database called the Urine Metabolome Database, or UMDB. The UMDB is a worldwide reference resource to facilitate clinical, drug and environmental urinalysis. The UMDB is maintained by The Metabolomics Innovation Centre, Canada's national metabolomics core facility.

The chemical composition of urine is of particular interest to physicians, nutritionists and environmental scientists because it reveals key information not only about a person's health, but also about what they have eaten, what they are drinking, what drugs they are taking and what pollutants they may have been exposed to in their environment. Analysis of urine for medical purposes dates back more than 3,000 years. In fact, up until the late 1800s, urine analysis using colour, taste and smell (called uroscopy) was one of the primary methods early physicians used to diagnose disease. Even today, millions of chemically based urine tests are performed every day to identify newborn metabolic disorders, diagnose diabetes, monitor kidney function, confirm bladder infections and detect illicit drug use.

"Most medical textbooks only list 50 to 100 chemicals in urine, and most common clinical urine tests only measure six to seven compounds," said Wishart. "Expanding the list of known chemicals in urine by a factor of 30 and improving the technology so that we can detect hundreds of urine chemicals at a time could be a real game-changer for medical testing." Wishart says this study is particularly significant because it will allow a whole new generation of fast, cheap and painless medical tests to be performed using urine instead of blood or tissue biopsies. In particular, he notes that new urine-based diagnostic tests for colon cancer, prostate cancer, celiac disease, ulcerative colitis, pneumonia and organ transplant rejection are already being developed or are about to enter the marketplace, thanks in part to this work.

The Human Urine Metabolome paper appeared today in PLOS ONE. The word metabolome (which is derived from the words "metabolism" and "genome") is defined as the complete collection of metabolites or chemicals found in a particular organism or tissue. The human urine study is part of a series of studies by researchers at the University of Alberta aimed at systematically characterizing the entire human metabolome. In 2008 the same U of A team described the chemical composition of human cerebrospinal fluid and in 2011 they determined the chemical composition of human blood.

"This is certainly not the final word on the chemical composition of urine," Wishart said. "As new techniques are developed and as more sensitive instruments are produced, I am sure that hundreds more urinary compounds will be identified. In fact, new compounds are being added to the UMDB almost every day.

"While the human genome project certainly continues to capture most of the world's attention, I believe that these studies on the human metabolome are already having a far more significant and immediate impact on human health."

Journal Reference:
  1. Souhaila Bouatra, Farid Aziat, Rupasri Mandal, An Chi Guo, Michael R. Wilson, Craig Knox, Trent C. Bjorndahl, Ramanarayan Krishnamurthy, Fozia Saleem, Philip Liu, Zerihun T. Dame, Jenna Poelzer, Jessica Huynh, Faizath S. Yallou, Nick Psychogios, Edison Dong, Ralf Bogumil, Cornelia Roehring, David S. Wishart. The Human Urine Metabolome. PLoS ONE, 2013; 8 (9): e73076 DOI: 10.1371/journal.pone.0073076

Photo- (Credit: © JPC-PROD / Fotolia)

Wednesday, September 4, 2013

Healio: Maternal transmission cause of HCV in children




Maternal transmission cause of HCV in children

Indolfi G. J Pediatr. 2013;doi:10.1016/j.jpeds.2013.06.077.

Mother-to-child transmission is the leading causes of hepatitis C virus infection in children, according to recent findings published in The Journal of Pediatrics

“Mother-to-child transmission of HCV is defined as transmission occurring during pregnancy or in the perinatal period from the HCV-infected mother to the fetus or to the child,” according to background information in the study. “The exact timing and the ultimate mechanism of mother-to-child transmission of HCV infection are unknown. Among children acquiring infections from the mother, only a few have been found to be HCV-RNA positive in the first days of life.”
Continue reading..

RVR, baseline characteristics identify patients who will benefit from dual HCV therapy

Andriulli A. J Hepatol. 2013;doi:10.1016/j.jhep.2013.07.040.

A model incorporating IL28B genotype, fibrosis stage, viral load and rapid virologic response was predictive of benefit from dual therapy among patients with chronic hepatitis C in a recent study.

In a retrospective analysis, researchers evaluated 1,045 treatment-naïve Caucasian patients with chronic HCV genotype 1 treated with pegylated interferon and ribavirin according to two models: The first incorporated only baseline variables associated with sustained virologic response at 24 weeks post-treatment (SVR), with the second model also included rapid virologic response at 4 weeks of therapy (RVR).
Continue reading....

Research consortium, FDA establish HCV collaboration

The Hepatitis C Therapeutic Registry and Research Network has announced a collaboration with the FDA for sharing data on the use and management of new HCV therapies, according to a press release.
Continue reading...

Hepatobiliary disease linked to intrahepatic cholestasis of pregnancy

Marschall H-U. Hepatology. 2013;doi:10.1002/hep.26444.

Women with intrahepatic cholestasis of pregnancy are at increased risk for hepatobiliary disease, and testing for hepatitis C may be warranted in this population, according to recent results.
In a population-based cohort study in Sweden, researchers evaluated data collected from the Swedish Medical Birth and Swedish Patient registers on 11,388 women with intrahepatic cholestasis of pregnancy (ICP) who gave birth between 1973 and 2009, along with 113,893 matched controls without ICP. Incidence of pre-existing hepatobiliary diseases and any that emerged after giving birth was recorded and compared between groups.
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HBV immunization program yields long-term benefits in Taiwan

Chiang C-J. JAMA. 2013;310:974-976.

A nationwide hepatitis B immunization program in Taiwan improved risk and mortality rates for liver disease continuously during a 30-year period, according to recent results.

Researchers evaluated the results of the immunization program, initiated during July 1984. Initially, the program only included infants born to high-risk mothers who tested positive for HBV surface antigen, but coverage extended to all newborns during July 1986, to preschool children during July 1987 and to all primary school children between 1988 and 1990. Coverage rates from 1984 to 2010 were 88.8% to 96.9%.
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Mental illness, substance use leading causes of illness globally

New data published in The Lancet suggest that mental and substance use disorders were the leading causes of nonfatal illness worldwide in 2010.

"Mental and substance use disorders are notable contributors to the global burden of disease, directly accounting for 7.4% of disease burden worldwide," Harvey A. Whiteford, MD, of the School of Population Health at the University of Queensland, Australia, and colleagues wrote. "These disorders were responsible for more of the global burden than were HIV/AIDS and tuberculosis, diabetes, or transport injuries."
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Study helps characterize HCV exacerbation course, outcomes

Study helps characterize HCV exacerbation course, outcomes

By: SHARON WORCESTER, IMNG Medical News
09/01/13

Most patients who experience an acute exacerbation of chronic hepatitis C achieve a sustained viral response after treatment with pegylated interferon and ribavirin, a long-term case-control follow-up study shows.

Of 82 consecutive patients who had an acute exacerbation of chronic hepatitis C virus (HCV) between January 2005 and June 2010, 32 were treated with peg-IFN and ribavirin, and 26 of those (81.2%) achieved a sustained viral response (SVR); of 82 control subjects with HCV who did not experience an acute exacerbation, 38 were treated with peg-IFN and ribavirin, and 23 of those (60.5%) achieved an SVR, Dr. Evangelista Sagnelli of Second University of Naples, Italy, and her colleagues reported online April 15 ahead of print in Clinical Gastroenterology and Hepatology.

The case patients, who were a mean age of 50 years, were anti-HCV/HCV RNA positive, hepatitis B surface antigen (HBsAG)/anti-HIV–negative patients who were naive to anti-HCV therapy. HCV genotype 1 was detected in 43.9% of cases, and genotype 2 was detected in 46.4% of cases.

The patients, who were followed for a median of 36 months after a 2-month observation period, were matched to 82 controls based on age, sex, and disease genotype. The controls, who were followed for 32 months, were HBsAG-negative patients who never showed signs of symptomatic acute exacerbation; they had steady alanine aminotransferase (ALT) values at four checks per year over the prior 5 years. They also were anti-HCV therapy-naive.

More case patients than control patients carried the interleukin-28B CC genotype (40.2% vs. 24.4%).

"In several determinations over the years before reactivation, these 82 patients had been HCV RNA positive with normal or moderately increased serum alanine aminotransferase levels, suggesting an indolent, slowly progressing course of chronic hepatitis C," the investigators said.

They had a mean aspartate aminotransferase (AST) serum value of 672 IU/dL, a mean ALT serum value of 1063 IU/dL, and a total bilirubin level of 15.87 mg/dL, the investigators said (Clinical Gastroenterology and Hepatology 2013 [doi:10.1016/j.chg.2013.03.025]).

In 43.5% of cases, ALT increased steadily to at least twice the baseline value, but more than half of these (56.5%) experienced a return to baseline values prior to the acute exacerbation, they noted.

A comparison of biopsy specimens showed increasing fibrosis in 78.3% of 23 cases, compared with 38.7% of 31 controls with biopsies available. Fibrosis scores remained stationary in 21.7% of the case patients, and in 58.1% in the control group. Only one patient in the control group (3.2%) improved.

Additionally, histologic activity index (HAI) scores deteriorated by at least 2 points in 60.9% of cases, compared with 9.7% of controls.

"An improvement in the HAI of at least 2 scores was found only in 4 (12.9%) in the control group patients, whereas 9 patients (39.1%) in the case group and 24 patients (77.5%) in the control group remained stationary," the investigators said.

This study, which was designed to better characterize the clinical presentation and course of symptomatic acute exacerbation of chronic hepatitis C, as well as outcomes and response to antiviral therapy, improves "the scanty knowledge" on these topics, they said.

The findings demonstrate marked variability in the clinical presentation, with ALT levels ranging from 6- to 43-fold the normal values, and serum bilirubin increases ranging from 2 to 22 mg/dL.

The investigators also observed that although the clinical course of acute exacerbations was usually characterized by a single flare, in some cases more than one flare occurred, and that acute exacerbations can occur at any age; in this study they occurred in patients ranging in age from 24 to 87 years.

Furthermore, the observation that nearly half of the study patient with an acute exacerbation showed HCV genotype 2 confirms the association between exacerbation and genotype 2 demonstrated in previous studies, they said.

"The reasons for this association remain unknown and warrant further investigation," they said, noting that exacerbations in the current study were also common among those with HCV genotype 1, but were rare in other HCV genotypes.

The unexpectedly higher prevalence of genotype IL-28-B CC in the case patients in this study "may suggest a greater likelihood of developing acute exacerbation of chronic hepatitis C for patients with the genotype," they said, noting that this observation also deserves additional study.

"Most probably acute exacerbation of chronic hepatitis C is a consequence of a reactivation of cell-mediated immune reaction to clear HCV infection, in some ways in line with the well-known propensity of IL-28-B CC genotype to undergo a spontaneous or treatment-induced clearance of HCV infection," they said.

Another observation in this study is that acute HCV exacerbation frequently causes deterioration both in fibrosis and necroinflammation – a finding that underscores "the profound implications of acute exacerbation of chronic hepatitis C on the progression to cirrhosis and risk of hepatocellular carcinoma," they said.

"In conclusion ... acute exacerbation of chronic hepatitis is responsible for an unfavorable outcome in patients with chronic hepatitis. However, the majority of patients with acute exacerbation of chronic hepatitis C obtained an SVR, most probably because of the high frequency of HCV genotype 2 and IL-28-B CC genotypes in the case group, and possibly because the reactivation of a cell-mediated immune response may favor HCV clearance," they said, adding that "the more rapid progression to cirrhosis and the risk of hepatocellular carcinoma strongly warrant the early initiation of anti-HCV therapy for acute exacerbation of chronic hepatitis C patients."

In this study, such patients showed "an impressive rate of SVR to peg-IFN + ribavirin," they said.

This study was supported by grants from PRIN 2008, MIUR, Rome, Italy, "Ottimizzazione Della Diagnosi Eziologica dell’epatite Acuta C E Studio dei Fattori Viro-Immunologici di Guarigione, di Cronicizzazione E di Risposta Alla Terapia Con Interferone," and Tegione Campania "Progetti per il miglioramento della qualita dell’assistenza, diagnosi e terapia del paziente afetto da AIDS nei settori: immunologia, coinfezioni, informazione e prevenzione," 2008. The authors reported having no disclosures.

09/01/13

Hepatitis C: Fluvastatin, Peginterferon, and Ribavirin for Naive Genotype 1 HCV


Journal of Viral Hepatitis

A Randomized Controlled Trial Adding Fluvastatin to Peginterferon and Ribavirin for Naïve Genotype 1 Hepatitis C Patients


T. Bader, L. D. Hughes, J. Fazili, B. Frost, M. Dunnam, A. Gonterman, M. Madhoun, C. E. AstonDisclosures

J Viral Hepat. 2013;20(9):622-627.

Discussion Only
Full Text Available @ Medscape

Safety

The primary purpose of the trial was to evaluate the safety issues involved when fluvastatin or simvastatin was added to peginterferon/ribavirin for 48 weeks. When we combined either fluvastatin or simvastatin prospectively with peginterferon/ribavirin in 25 patients for 48 weeks, we did not observe any unique difficulty and no patient discontinued therapy. Other groups who have combined 20 mg/day of fluvastatin with peginterferon/ribavirin in larger randomized control trials (RCTs) (noted later) also have failed to report any unique side effects or the occurrence of myopathy with the use of fluvastatin. The worldwide prospective RCT experience with 20 mg/day fluvastatin when combined with peginterferon/ribavirin and used against HCV for 48-week therapy now totals 181 patients for 8 688 weeks of drug exposure without incident. The latter fluvastatin total does not include our seven simvastatin patients or nonrandomized prospective studies of fluvastatin/peginterferon/ribavirin.[7]
Efficacy

When fluvastatin or simvastatin was added to peginterferon/ribavirin, 13 of 25 (52%) obtained sustained viral response (SVR), whereas in the control group using peginterferon/ribavirin, 5 of 20 (25%) reached SVR (P = 0.078). This indicates a strong trend favouring the addition of fluvastatin. We did not reach our enrolment goal of 80 patients that was based on the results of a retrospective study of patients who by chance took a statin along with peginterferon and ribavirin.[8] Thus, it is likely that an insufficient sample was accumulated. Enrolling patients became difficult when the promise of direct antiviral agents became a reality. Notably, maintaining the observed proportion of SVR in each group and artificially increasing the total sample size to 80 gave P = 0.021.

As with any RCT, a positive statistical effect favouring the intervention can be disguised by poor performance of the control group. Our current control group achieved a 25% SVR rate. This is identical to our previous retrospective report of naïve-to-treatment genotype 1 patients not on a statin of 25% (16/65).[8] The national VA database for this same classification of genotype 1 patients (n = 20 477) has been reported to have an SVR rate of 26%.[9] Thus, our control group performed the same as our own published historical group or the national VA database.

The 52% SVR rate for the statin group in the current report compares similarly to our retrospective SVR report of 55%. Throughout the time period encompassed by both the retrospective database and prospective trial, the statin used almost exclusively for hypercholesterolaemia in the VA system was simvastatin. Accordingly, 20 of 25 HCV patients in the retrospective statin report were taking simvastatin.[8]

In any case, our results serve to support the results of two other RCTs of fluvastatin published that have tested the addition of our discovered dose of 20 mg/day of fluvastatin to peginterferon/ribavirin. Georgescu et al. gave fluvastatin 20 mg/day combined with peginterferon/ribavirin in an RCT to 104 naïve-to-treatment genotype 1 patients and compared the outcome with 105 control patients. The SVR rates were 63.5% and 49.5% (P = 0.05), respectively. When the 50 patients with metabolic syndrome (as defined by National Cholesterol Education Program Adult Treatment Panel III criteria) were subtracted from each arm in a post hoc analysis, the SVR rates were 74.4% and 58.4%, respectively (P = 0.049).[10]

The second trial reported by Kondo et al.[11] also used 20 mg/day of fluvastatin with peginterferon/ribavirin in 94 naïve-to-treatment genotype 1b patients with high viral loads. The reported SVR rates in the fluvastatin and control arms were 63% and 42% (P = 0.047), respectively.

Combining all three studies (Georgescu et al., Kondo et al. and ours, total sample size = 348), the reported SVR rates in the fluvastatin and control arms were 62% and 45% (P = 0.0018).

When our trial is viewed together with the two other RCTs using fluvastatin at 20 mg/day, the evidence is growing that fluvastatin improves the SVR rate when given to naïve-to-treatment genotype 1 HCV patients.

The mechanism of statin action against hepatitis C is poorly understood. Hypothetically, if the effect is related to changes in extracellular cholesterol, one has to account for the observation that fluvastatin is the weakest LDL-lowering statin and yet it has the strongest anti-HCV effect of all the statins tested.[2] Moreover, it is at the lowest approved dose for hypercholesterolaemia, 20 mg, for which fluvastatin has the greatest anti-HCV effect.[3] In retrospective analysis, some have tried to relate outcomes of peginterferon alfa/ribavirin double therapy to the baseline serum LDL or baseline total cholesterol. In the largest post hoc analysis of statin and serum cholesterol (IDEAL trial), statin use was determined to be an independent factor from cholesterol as a predictor of response to peginterferon/ribavirin.[12] Later analysis of a smaller group from the IDEAL trial suggested that serum LDL cholesterol was strongly associated with the IL28B genotype and that it was this latter parameter that was more directly related to SVR outcome with peginterferon/ribavirin than cholesterol.[13] In our prospective work that delineated fluvastatin to have the strongest anti-HCV effect at 20 mg/day, we were unable to relate baseline LDL or changes in serum LDL to antiviral effect[3] In the current work, there were no differences between groups in regard to baseline serum LDL or total cholesterol (Table 1).

The limitations of our study include a time period before which IL28B genotypes were appreciated or commercially available. As with many VA studies, ours tested only men. Liver biopsies were not performed; however, platelet counts are a practical surrogate, and these counts did not differ between groups. Based upon our retrospective study of statins8, we planned an enrolment of 80 patients to reduce the possibility of type 2 error below the typically accepted level of 20%. With the prospective advent of protease inhibitors, it became increasingly difficult to enrol patients. Our closing study number was 45. Finally, the data reported for simvastatin are only preliminary in nature.


The relevance of the addition of fluvastatin to peginterferon/ribavirin in the era of HCV protease inhibitors may be greatest as cost-effective improvement in SVR for resource-limited areas. The current price for adding only the cost of the tablets for boceprevir or telaprevir ranges from US $28 000 to $55 000 per treated patient, respectively.[14] This does not include the cost of the peginterferon/ribavirin component or the expense of medical management. In contrast, the 20-mg capsule of fluvastatin was approved in generic form by the FDA on 13 April 2012. Prices for the generic version are not immediately available, but will likely become a US dollar per capsule as in other countries.[15] The 48-week cost of fluvastatin will then be US $336. There has not been a noninferiority head-to-head trial of fluvastatin triple therapy vs protease inhibitor triple therapy to compare SVR outcome.

Development of fluvastatin for HCV purposes has been slowed by the nonproprietary status of the drug and the persisting mythological paradigm of statin-induced hepatotoxicity.[16–19] It is relevant that the FDA recently revised all statin labels to state that monitoring of statins with liver tests is no longer recommended.[19] The 20-mg dose of fluvastatin has thus far been shown to be safe in HCV patients either alone or when added to peginterferon/ribavirin for 48 weeks.

The future of hepatitis C treatment seems to be heading towards combinations of oral antiviral agents. Given the positive results of the three randomized controlled trials reported here, further studies of fluvastatin for use against HCV as part of a multidrug regimen are needed.

  • Abstract and Introduction
  • Methods
  • Results 
  • Discussion